Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015882952.1_cds_XP_016438335.1_34006
CDS Infomation

[gene=LOC107764293] [db_xref=GeneID:107764293] [protein=phosphoinositide phosphatase SAC2-like] [protein_id=XP_016438335.1] [location=join(105840..105935,107205..107409,107492..107657,108222..108444,108727..108803,109140..109327,109402..109499,109620..109753,109866..109998)] [gbkey=CDS]
Sequence

ATGGGGACAGATGACAAGCAACGGCGTTTAATCAATTCACATGAAAACAGCAGAGGCTTT
TATCTGCAAAAGTTCCGGCTTTATGAGACTCGCTCGAACTTCTACATGGTTGGATGGGAT
AAGACCAGAACTTTTTGGAAAGTATTAAAGATTGACAGATTAGAACCTTCGGAACTAATC
ATTCATGAAGACCCTACGTCATATTCAGAGATTGAATGCTTAGACCTCCTAAAAAGAATA
CATGAAGGAAACAGATCTACTGGAGGGCTTAAATTCATTTCTCGTTGCTACGGAATTATT
GGTTTTATAAAGTTTTTGGGACCTTATTACTTCCTGGTTATCACAGAAAGAAGGAAGATT
GGAAAGATATGTGGTCATGCTGTTTATGCTATCACTAAGAGCGAGATGTTCCCAATTCCG
CACTCTACTTTGCTTTCCAATATGGCTTATTCTAAGGATGAGAACAGATATCAAAAGCTC
CTGCACATGGTGGACCTCACAAAGGACTTCTTTTTCAGCTACTCCTATCCTATTATGATT
AGTTTTCAAAAGAATCTGAGCAGCTCAGAGACAGGACTCACCCTTTATGAGACAATGTTT
GTATGGAATGAATTCTTAACTCGCGGAATCCACAATCAGCTCCAAAATACTCTCTGGACT
GTTGCGTTAGTCTATGGGTTCTTTAAACAGGTTACACTTACTATTTCTGCACAGGACTTC
ATCTTAACCCTAATTGCTAGACGTTCTCGTCATTATGCTGGTACCAGATATTTAAAAAGA
GGAGTAAATGAGAAGGGTCATGTAGCAAATGACGTCGAGACAGAACAGATTGTGTTTGAA
AATGTACGTGAAGGGTCCCCTGTTGGAGTAAGCGCTGTTGTACAGAACCGTGGTTCAATA
CCTCTTTTCTGGTCTCAGGAAACTTCACGTTTGAATATAAAACCTGACATCATATTGTCT
AGGAAGGACCTCAAGTTTGAAGCCACCAAACTTCACTTTGAAGATCTTATTCAAAGATAT
GGAAATCCAGTTATTATATTAAATTTAATTAAGACTCGTGAGAAGAGGCCCAGAGAAACA
ATTCTTCGTGCAGAATTCGCTAATGCTATTGACTTCATAAATAAAGATCTTCCTGAGGAC
AACCGGTTGAGATTTCTTCACTGGGATCTAAACAAACATCCAAGAATCAAAGCTACAAAG
GCCTTGTTACGTCTAGGTGAGGTGGCCATTAATGCTTTGGAGTTAACAGGCCTTTTCCAT
TGTCAGCTAATCCCTACATCAAGAAGTGGGGAATTGCTAAAGCTGTCATCCATCGGGTGA

Peptide Sequence

PEP ID

XP_016438335.1
PEP Infomation

PREDICTED: phosphoinositide phosphatase SAC2-like [Nicotiana tabacum]
Sequence

MGTDDKQRRLINSHENSRGFYLQKFRLYETRSNFYMVGWDKTRTFWKVLKIDRLEPSELI
IHEDPTSYSEIECLDLLKRIHEGNRSTGGLKFISRCYGIIGFIKFLGPYYFLVITERRKI
GKICGHAVYAITKSEMFPIPHSTLLSNMAYSKDENRYQKLLHMVDLTKDFFFSYSYPIMI
SFQKNLSSSETGLTLYETMFVWNEFLTRGIHNQLQNTLWTVALVYGFFKQVTLTISAQDF
ILTLIARRSRHYAGTRYLKRGVNEKGHVANDVETEQIVFENVREGSPVGVSAVVQNRGSI
PLFWSQETSRLNIKPDIILSRKDLKFEATKLHFEDLIQRYGNPVIILNLIKTREKRPRET
ILRAEFANAIDFINKDLPEDNRLRFLHWDLNKHPRIKATKALLRLGEVAINALELTGLFH
CQLIPTSRSGELLKLSSIG

Transcript Sequence

Gene sequence data has not been registered.